CN EN

NI Xumin

Professional title:Associate Professor

Office No.:

Email:xmni@bjtu.edu.cn

Education

Ph.D., Probability and Statistics, Sep. 2011 - Sep. 2016, Beijing Jiaotong University, Beijing, China

B.S., Mathematics, Sep. 2007 - Jul. 2011, Beijing Jiaotong University, Beijing, China

Professional Experience

Associate Professor, School of Mathematics and Statistics, Beijing Jiaotong University

Research Field

Biostatistics; Computational Biology; Stochastic Processes and Their Applications

Projects

2019-2021, National Natural Science Foundation of China (No. 11801027)

2020-2021, Fundamental Research Funds for the Central Universities (No. 2020RC001)

2017-2018, China Postdoctoral Science Foundation (No. 2017M620595)

Teaching Courses

Probability and statistics, Stochastic process

Paper

  1. Kai Yuan#, Xumin Ni#, Chang Liu#, Yuwen Pan#, Lian Deng#, Rui Zhang#, Yang Gao, Xueling Ge, Jiaojiao Liu, Xixian Ma, Haiyi Lou, Taoyang Wu and Shuhua Xu*. Refining models of archaic–modern human admixture in Eurasia with ArchaicSeeker 2.0. Nature Communications. 2021. (accepted) (co-first author)
  2. Xian Chen, Wei Guo, Xumin Ni*. (2021). Markov Jump Processes in Estimating Sharing of Identity by Descent. Acta Mathematicae Applicatae Sinica, English Serie, 37(1): 183-191.
  3. Xiong Yang, Kai Yuan, Xumin Ni, Ying Zhou, Wei Guo, Shuhua Xu*. (2020). AdmixSim: A Forward-time Simulator for Various Complex Scenarios of Population Admixture. Frontiers in Genetics, 11:601439.
  4. Xumin Ni, Mengshi Zhou, Heming Wang, Karen Y. He, Uli Broeckel, Craig Hanis, Sharon Kardia, Susan Redline, Richard S Cooper, Hua Tang, Xiaofeng Zhu*. (2020). Detecting fitness epistasis in recently admixed populations with genome-wide data. BMC Genomics, 21:476.
  5. Xumin Ni#, Chendi Zhu#, Qing Li#, Hui Jiang, Jingyi Liu, Zhi Chen, Li He, Junnan Jia, Zongde Zhang, Liang Ma*, Weimin Li*. (2020). Epidemiology characteristics of the clonal complexes of Mycobacterium tuberculosis Lineage 4 in China. Infection, Genetics and Evolution, 104363.
  6. Xumin Ni#, Kai Yuan#, Chang Liu, Qidi Feng, Lei Tian, Zhiming Ma*, Shuhua Xu*. (2019). MultiWaver 2.0: modeling discrete and continuous gene flow to reconstruct complex population admixtures. European Journal of Human Genetics,27(1), 133.
  7. Xumin Ni#, Kai Yuan#, Xiong Yang#, Qidi Feng, Wei Guo, Zhiming Ma*, Shuhua Xu*. (2018). Inference of Multiple-Wave Admixtures by Length Distribution of Ancestral Tracks. Heredity, 121(1), 52.
  8. Haixia Chen#, Li He#, Chao Cai#, Jingyi Liu, Junnan Jia, Liang Ma, Hairong Huang, Lixia Wang, Xumin Ni*, Jimin Gao*, Weimin, Li*. (2018). The Characteristics of Distribution of Mycobacterium tuberculosis Lineages in China. Science China Life Sciences, 61(6), 651-659.
  9. Bing Li, Jun Liu, Yanan Yu, Pengqian Wang, Yingying Zhang, Xumin Ni, Qiong Liu, Xiaoxu Zhang, Zhong Wang, Yongyan Wang*. (2018). Network-Wide Screen Identifies Variation of Novel Precise On-Module Targets Using Conformational Modudaoism. CPT: Pharmacometrics & Systems Pharmacology, 7(1), 16-25.
  10. Qidi Feng#, Yan Lu#, Xumin Ni#, Kai Yuan#, Yajun Yang#, Xiong Yang, Chang Liu, Haiyi Lou, Zhilin Ning, Yuchen Wang, Dongsheng Lu, Chao Zhang, Ying Zhou, Meng Shi, Lei Tian, Xiaoji Wang, Xi Zhang, Jing Li, Asifullah Khan, Yaqun Guan, Kun Tang*, Sijia Wang*, Shuhua Xu*. (2017). Genetic History of Xinjiang’s Uyghurs Suggests Bronze Age Multiple-Way Contacts in Eurasia. Molecular Biology and Evolution, 34(10), 2572–2582. (co-first author)
  11. Haixia Chen#, Li He#, Hairong Huang#, Chengmin Shi, Xumin Ni, Guangming Dai, Liang Ma*, Weimin Li*. (2017). Mycobacterium Tuberculosis Lineage Distribution in Xinjiang and Gansu Provinces, China. Scientific Reports, 7, 1068.
  12. Kai Yuan#, Ying Zhou#, Xumin Ni#, Yuchen Wang, Chang Liu and Shuhua Xu*. (2017). Models, Methods and Tools for Ancestry Inference and Admixture Analysis. Quantitative Biology, 5(3), 236-250. (co-first author)
  13. Ying Zhou#, Kai Yuan#, Yaoliang Yu, Xumin Ni, Pengtao Xie, Eric P. Xing, Shuhua Xu*. (2017). Inference of Multiple-Wave Population Admixture by Modeling Decay of Linkage Disequilibrium with Polynomial Functions. Heredity, 118(5), 503-510.
  14. Xumin Ni, Wei Guo, Kai Yuan, Xiong Yang, Zhiming Ma, Shuhua Xu, Shihua Zhang*. (2016). A Probabilistic Method for Estimating the Sharing of Identity by Descent for Populations with Migration. IEEE/ACM Transactions on Computational Biology and Bioinformatics, 13(2), 281-90.
  15. Xumin Ni#, Xiong Yang#, Wei Guo, Kai Yuan, Ying Zhou, Zhiming Ma*, Shuhua Xu*. (2016). Length Distribution of Ancestral Tracks under a General Admixture Model and Its Applications in Population History Inference. Scientific Reports, 6, 20048.